Fotis A. Baltoumas, Ph.D.
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Useful Links


Greek Education in Bioinformatics & Biophysics (Undergraduate):
Department of Biology, National & Kapodistrian University of Athens
- Bioinformatics course 
- Biophysics  course
Department of Computer Science and Biomedical Informatics, University of Thessaly
- Bioinformatics, Pt. I course 
- Bioinformatics, Pt. II course
- Special topics in Bioinformatics course
- Systems Biology course
- Special topics in Computational Biology course
Department of Biology, Aristotelian University of Thessaloniki
- Bioinformatics course
Department of Molecular Biology and Genetics, Democritus University of Thrace
- Introduction to Computational Biology course 
​- Bioinformatics course
- Special Topics in Computational Biology
- Special Topics in Bioinformatics course
- Structural Biology course

Greek Education in Bioinformatics (Post-graduate):
- Bioinformatics - Computational Biology @ Department of Biology, National & Kapodistrian University of Athens
- Data Science and Information Technologies (formerly known as "Information Technologies in Medicine and Biology") @ Department of Informatics & Telecommunications, National & Kapodistrian University of Athens
- Bioinformatics @ School of Medicine, University of Crete
- Informatics & Computational Biomedicine @ Department of Computer Science and Biomedical Informatics, University of Thessaly 

- Master of Science Bioinformatics and Neuroinformatics @ Hellenic Open University
Greek Research Institutes:
- National Hellenic Research Foundation
- Biomedical Research Foundation of the Academy of Athens (BRFAA)
- Biomedical Sciences Research Center (BSRC) "Alexander Fleming"
- National Center for Scientific Research "Demokritos"

Biophysics, Bioinformatics and Computational Chemistry Laboratories:
​
- Biophysics & Bioinformatics Lab @ National & Kapodistrian University of Athens
- Computational Genetics Group @ University of Thessaly
- Bioinformatics Research Laboratory @ University of Cyprus
​- Bioinformatics & Integrative Biology Lab @ BSRC "Alexander Fleming"
- Nicholas Glykos's Lab @ University of Thrace
- Zoe Cournia's Lab @ the BRFAA
- Siewert J. Marrink's Lab @ University of Groningen, the Netherlands
- Theoretical & Computational Biophysics Group @ University of Illinois at Urbana-Champaign
- The Lemkul Lab @ Virginia Tech University
- The Bonvin Lab @ Utrecht University
​

Scientific Societies:
- Hellenic Society for Computational Biology & Bioinformatics - HSCBB
- Hellenic Crystallographic Association (HeCrA)
- Hellenic Society for Biological Sciences - HSBS / EEBE
- Panhellenic Union of Bioscientists (PEV)
​- International Society for Computational Biology (ISCB)
​Molecular Dynamics Links:
- GROMACS
- NAMD
- AMBER
​- CHARMM
- GROMACS Tutorials
- The MARTINI Force Field
- CHARMM-GUI
​- Automated Topology Builder (ATB) for GROMOS
​
- CGenFF

Sequence Analysis:
- The European Bioinformatics Institute Tools
- HMMER
- JalView
- BLAST
- Pfam
- PROSITE

Structural Bioinformatics & Computational Chemistry:
- RCSB PDB
- Cambridge Crystallographic Data Centre
- PyMOL
- The PyMOL Wiki
- CCP4
- UCSF Chimera
- VMD
- Avogadro
- HADDOCK
- MODELLER

Network Analysis:
- Cytoscape
- Cytoscape.js
- NetworkX

Programming & Scripting resources:
- Python
- BioPython
- Perl
- The BioPerl project
- Anaconda (and Conda in general)
- PHP
- W3Schools for web-programming and design
Other Stuff:
​- Apophenia.gr: the professional website of author George Ioannidis, director of Daidaleos publishing and former collaborator of mine during my time in Mystery magazine.
- Necronomicon Magic:  a little website I used to manage during the aforementioned time, dealing with the Cthulhu mythos and those who worship the Great Old Ones.
- Aiolos Publishing:  Quality books in Sci-Fi, Fantasy, Weird Fiction, Horror, history and philosophy.  Also, one of the two places you'll find decent Greek translations of H.P. Lovecraft's works.
- Locus-7 Publishing: The publishing company of George Balanos, and the other place you'll find decent Greek translations of Lovecraft's works.
 
​- Agrinio Culture:  A useful resource on my hometown, if - for *some* reason - you want to go there...
​

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